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- from functools import partial
- import torch
- import torch.nn.functional as F
- from torch import nn
- def drop_path(
- x, drop_prob: float = 0.0, training: bool = False, scale_by_keep: bool = True
- ):
- """Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
- This is the same as the DropConnect impl I created for EfficientNet, etc networks, however,
- the original name is misleading as 'Drop Connect' is a different form of dropout in a separate paper...
- See discussion: https://github.com/tensorflow/tpu/issues/494#issuecomment-532968956 ... I've opted for
- changing the layer and argument names to 'drop path' rather than mix DropConnect as a layer name and use
- 'survival rate' as the argument.
- """ # noqa: E501
- if drop_prob == 0.0 or not training:
- return x
- keep_prob = 1 - drop_prob
- shape = (x.shape[0],) + (1,) * (
- x.ndim - 1
- ) # work with diff dim tensors, not just 2D ConvNets
- random_tensor = x.new_empty(shape).bernoulli_(keep_prob)
- if keep_prob > 0.0 and scale_by_keep:
- random_tensor.div_(keep_prob)
- return x * random_tensor
- class DropPath(nn.Module):
- """Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).""" # noqa: E501
- def __init__(self, drop_prob: float = 0.0, scale_by_keep: bool = True):
- super(DropPath, self).__init__()
- self.drop_prob = drop_prob
- self.scale_by_keep = scale_by_keep
- def forward(self, x):
- return drop_path(x, self.drop_prob, self.training, self.scale_by_keep)
- def extra_repr(self):
- return f"drop_prob={round(self.drop_prob,3):0.3f}"
- class LayerNorm(nn.Module):
- r"""LayerNorm that supports two data formats: channels_last (default) or channels_first.
- The ordering of the dimensions in the inputs. channels_last corresponds to inputs with
- shape (batch_size, height, width, channels) while channels_first corresponds to inputs
- with shape (batch_size, channels, height, width).
- """ # noqa: E501
- def __init__(self, normalized_shape, eps=1e-6, data_format="channels_last"):
- super().__init__()
- self.weight = nn.Parameter(torch.ones(normalized_shape))
- self.bias = nn.Parameter(torch.zeros(normalized_shape))
- self.eps = eps
- self.data_format = data_format
- if self.data_format not in ["channels_last", "channels_first"]:
- raise NotImplementedError
- self.normalized_shape = (normalized_shape,)
- def forward(self, x):
- if self.data_format == "channels_last":
- return F.layer_norm(
- x, self.normalized_shape, self.weight, self.bias, self.eps
- )
- elif self.data_format == "channels_first":
- u = x.mean(1, keepdim=True)
- s = (x - u).pow(2).mean(1, keepdim=True)
- x = (x - u) / torch.sqrt(s + self.eps)
- x = self.weight[:, None] * x + self.bias[:, None]
- return x
- class ConvNeXtBlock(nn.Module):
- r"""ConvNeXt Block. There are two equivalent implementations:
- (1) DwConv -> LayerNorm (channels_first) -> 1x1 Conv -> GELU -> 1x1 Conv; all in (N, C, H, W)
- (2) DwConv -> Permute to (N, H, W, C); LayerNorm (channels_last) -> Linear -> GELU -> Linear; Permute back
- We use (2) as we find it slightly faster in PyTorch
- Args:
- dim (int): Number of input channels.
- drop_path (float): Stochastic depth rate. Default: 0.0
- layer_scale_init_value (float): Init value for Layer Scale. Default: 1e-6.
- mlp_ratio (float): Ratio of mlp hidden dim to embedding dim. Default: 4.0.
- kernel_size (int): Kernel size for depthwise conv. Default: 7.
- dilation (int): Dilation for depthwise conv. Default: 1.
- """ # noqa: E501
- def __init__(
- self,
- dim: int,
- drop_path: float = 0.0,
- layer_scale_init_value: float = 1e-6,
- mlp_ratio: float = 4.0,
- kernel_size: int = 7,
- dilation: int = 1,
- ):
- super().__init__()
- self.dwconv = nn.Conv1d(
- dim,
- dim,
- kernel_size=kernel_size,
- padding=int(dilation * (kernel_size - 1) / 2),
- groups=dim,
- ) # depthwise conv
- self.norm = LayerNorm(dim, eps=1e-6)
- self.pwconv1 = nn.Linear(
- dim, int(mlp_ratio * dim)
- ) # pointwise/1x1 convs, implemented with linear layers
- self.act = nn.GELU()
- self.pwconv2 = nn.Linear(int(mlp_ratio * dim), dim)
- self.gamma = (
- nn.Parameter(layer_scale_init_value * torch.ones((dim)), requires_grad=True)
- if layer_scale_init_value > 0
- else None
- )
- self.drop_path = DropPath(drop_path) if drop_path > 0.0 else nn.Identity()
- def forward(self, x, apply_residual: bool = True):
- input = x
- x = self.dwconv(x)
- x = x.permute(0, 2, 1) # (N, C, L) -> (N, L, C)
- x = self.norm(x)
- x = self.pwconv1(x)
- x = self.act(x)
- x = self.pwconv2(x)
- if self.gamma is not None:
- x = self.gamma * x
- x = x.permute(0, 2, 1) # (N, L, C) -> (N, C, L)
- x = self.drop_path(x)
- if apply_residual:
- x = input + x
- return x
- class ParallelConvNeXtBlock(nn.Module):
- def __init__(self, kernel_sizes: list[int], *args, **kwargs):
- super().__init__()
- self.blocks = nn.ModuleList(
- [
- ConvNeXtBlock(kernel_size=kernel_size, *args, **kwargs)
- for kernel_size in kernel_sizes
- ]
- )
- def forward(self, x: torch.Tensor) -> torch.Tensor:
- return torch.stack(
- [block(x, apply_residual=False) for block in self.blocks] + [x],
- dim=1,
- ).sum(dim=1)
- class ConvNeXtEncoder(nn.Module):
- def __init__(
- self,
- input_channels=3,
- depths=[3, 3, 9, 3],
- dims=[96, 192, 384, 768],
- drop_path_rate=0.0,
- layer_scale_init_value=1e-6,
- kernel_sizes: tuple[int] = (7,),
- ):
- super().__init__()
- assert len(depths) == len(dims)
- self.channel_layers = nn.ModuleList()
- stem = nn.Sequential(
- nn.Conv1d(
- input_channels,
- dims[0],
- kernel_size=7,
- padding=3,
- padding_mode="replicate",
- ),
- LayerNorm(dims[0], eps=1e-6, data_format="channels_first"),
- )
- self.channel_layers.append(stem)
- for i in range(len(depths) - 1):
- mid_layer = nn.Sequential(
- LayerNorm(dims[i], eps=1e-6, data_format="channels_first"),
- nn.Conv1d(dims[i], dims[i + 1], kernel_size=1),
- )
- self.channel_layers.append(mid_layer)
- block_fn = (
- partial(ConvNeXtBlock, kernel_size=kernel_sizes[0])
- if len(kernel_sizes) == 1
- else partial(ParallelConvNeXtBlock, kernel_sizes=kernel_sizes)
- )
- self.stages = nn.ModuleList()
- drop_path_rates = [
- x.item() for x in torch.linspace(0, drop_path_rate, sum(depths))
- ]
- cur = 0
- for i in range(len(depths)):
- stage = nn.Sequential(
- *[
- block_fn(
- dim=dims[i],
- drop_path=drop_path_rates[cur + j],
- layer_scale_init_value=layer_scale_init_value,
- )
- for j in range(depths[i])
- ]
- )
- self.stages.append(stage)
- cur += depths[i]
- self.norm = LayerNorm(dims[-1], eps=1e-6, data_format="channels_first")
- self.apply(self._init_weights)
- def _init_weights(self, m):
- if isinstance(m, (nn.Conv1d, nn.Linear)):
- nn.init.trunc_normal_(m.weight, std=0.02)
- nn.init.constant_(m.bias, 0)
- def forward(
- self,
- x: torch.Tensor,
- ) -> torch.Tensor:
- for channel_layer, stage in zip(self.channel_layers, self.stages):
- x = channel_layer(x)
- x = stage(x)
- return self.norm(x)
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